Date Log
Evolution of human diseases
Corresponding Author(s) : harem othman smail
International Journal of Applied Biology,
Vol. 4 No. 1 (2020): International Journal of Applied Biology
Abstract
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- - Albalat, R. and Cañestro, C., 2016. Evolution by gene loss. Nature Reviews Genetics, 17(7), p.379.
- - Alizon, S. and Fraser, C., 2013. Within-host and between-host evolutionary rates across the HIV-1 genome. Retrovirology, 10(1), p.49.
- - Amor, D.J. and Choo, K.A., 2002. Neocentromeres: role in human disease, evolution, and centromere study. The American Journal of Human Genetics, 71(4), pp.695-714.
- - Andersson, D.I., 2003. Persistence of antibiotic resistant bacteria. Current opinion in microbiology, 6(5), pp.452-456.
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- - Armelagos, G.J., Barnes, K.C. and Lin, J., 1996. Disease in human evolution: the reemergence of infectious disease in the third epidemiological transition.
- - Badano, J.L. and Katsanis, N., 2002. Human genetics and disease: Beyond Mendel: an evolving view of human genetic disease transmission. Nature Reviews Genetics, 3(10), p.779.
- - Baquero, F., Alvarez‐Ortega, C. and Martinez, J.L., 2009. Ecology and evolution of antibiotic resistance. Environmental Microbiology Reports, 1(6), pp.469-476.
- - Bednar, M.M., Sturdevant, C.B., Tompkins, L.A., Arrildt, K.T., Dukhovlinova, E., Kincer, L.P. and Swanstrom, R., 2015. Compartmentalization, viral evolution, and viral latency of HIV in the CNS. Current HIV/AIDS Reports, 12(2), pp.262-271.
- - Bonsignori, M., Liao, H.X., Gao, F., Williams, W.B., Alam, S.M., Montefiori, D.C. and Haynes, B.F., 2017. Antibody‐virus co‐evolution in HIV infection: paths for HIV vaccine development. Immunological reviews, 275(1), pp.145-160.
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- - Bui, Q.T., Golinelli-Cohen, M.P. and Jackson, C.L., 2009. Large Arf1 guanine nucleotide exchange factors: evolution, domain structure, and roles in membrane trafficking and human disease. Molecular Genetics and Genomics, 282(4), pp.329-350.
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- - Chen, J.M., Cooper, D.N., Chuzhanova, N., Férec, C. and Patrinos, G.P., 2007. Gene conversion: mechanisms, evolution and human disease. Nature Reviews Genetics, 8(10), p.762.
- - Courvalin, P., 2016. Why is antibiotic resistance a deadly emerging disease?. Clinical Microbiology and Infection, 22(5), pp.405-407.
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- - Ewald, P.W., 1980. Evolutionary biology and the treatment of signs and symptoms of infectious disease. Journal of theoretical Biology, 86(1), pp.169-176.
- - Farrell, M.J. and Davies, T.J., 2019. Disease mortality in domesticated animals is predicted by host evolutionary relationships. Proceedings of the National Academy of Sciences, 116(16), pp.7911-7915.
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- - Goward, C.R., Scawen, M.D., Murphy, J.P. and Atkinson, T., 1993. Molecular evolution of bacterial cell-surface proteins. Trends in biochemical sciences, 18(4), pp.136-140.
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References
- Achtman, M., 2008. Evolution, population structure, and phylogeography of geneically monomorphic bacterial pathogens. Annu. Rev. Microbiol., 62, pp.53-70.
- Albalat, R. and Cañestro, C., 2016. Evolution by gene loss. Nature Reviews Genetics, 17(7), p.379.
- Alizon, S. and Fraser, C., 2013. Within-host and between-host evolutionary rates across the HIV-1 genome. Retrovirology, 10(1), p.49.
- Amor, D.J. and Choo, K.A., 2002. Neocentromeres: role in human disease, evolution, and centromere study. The American Journal of Human Genetics, 71(4), pp.695-714.
- Andersson, D.I., 2003. Persistence of antibiotic resistant bacteria. Current opinion in microbiology, 6(5), pp.452-456.
- Archer, E. and Blair, S.N., 2011. Physical activity and the prevention of cardiovascular disease: from evolution to epidemiology. Progress in cardiovascular diseases, 53(6), pp.387-396.
- Armelagos, G.J., Barnes, K.C. and Lin, J., 1996. Disease in human evolution: the reemergence of infectious disease in the third epidemiological transition.
- Badano, J.L. and Katsanis, N., 2002. Human genetics and disease: Beyond Mendel: an evolving view of human genetic disease transmission. Nature Reviews Genetics, 3(10), p.779.
- Baquero, F., Alvarez‐Ortega, C. and Martinez, J.L., 2009. Ecology and evolution of antibiotic resistance. Environmental Microbiology Reports, 1(6), pp.469-476.
- Bednar, M.M., Sturdevant, C.B., Tompkins, L.A., Arrildt, K.T., Dukhovlinova, E., Kincer, L.P. and Swanstrom, R., 2015. Compartmentalization, viral evolution, and viral latency of HIV in the CNS. Current HIV/AIDS Reports, 12(2), pp.262-271.
- Bonsignori, M., Liao, H.X., Gao, F., Williams, W.B., Alam, S.M., Montefiori, D.C. and Haynes, B.F., 2017. Antibody‐virus co‐evolution in HIV infection: paths for HIV vaccine development. Immunological reviews, 275(1), pp.145-160.
- Branson, B.M., 2010. The future of HIV testing. JAIDS Journal of Acquired Immune Deficiency Syndromes, 55, pp.S102-S105.
- Bui, Q.T., Golinelli-Cohen, M.P. and Jackson, C.L., 2009. Large Arf1 guanine nucleotide exchange factors: evolution, domain structure, and roles in membrane trafficking and human disease. Molecular Genetics and Genomics, 282(4), pp.329-350.
- Bull, J.J. and Lauring, A.S., 2014. Theory and empiricism in virulence evolution. PLoS pathogens, 10(10), p.e1004387.
- Casas, V. and Maloy, S., 2011. Role of bacteriophage-encoded exotoxins in the evolution of bacterial pathogens. Future microbiology, 6(12), pp.1461-1473.
- Castro-Nallar, E., Pérez-Losada, M., Burton, G.F. and Crandall, K.A., 2012. The evolution of HIV: inferences using phylogenetics. Molecular phylogenetics and evolution, 62(2), pp.777-792.
- Chan, J.M., Carlsson, G. and Rabadan, R., 2013. Topology of viral evolution. Proceedings of the National Academy of Sciences, 110(46), pp.18566-18571.
- Chen, J., Swofford, R., Johnson, J., Cummings, B.B., Rogel, N., Lindblad-Toh, K., Haerty, W., Di Palma, F. and Regev, A., 2019. A quantitative framework for characterizing the evolutionary history of mammalian gene expression. Genome research, 29(1), pp.53-63.
- Chen, J.M., Cooper, D.N., Chuzhanova, N., Férec, C. and Patrinos, G.P., 2007. Gene conversion: mechanisms, evolution and human disease. Nature Reviews Genetics, 8(10), p.762.
- Courvalin, P., 2016. Why is antibiotic resistance a deadly emerging disease?. Clinical Microbiology and Infection, 22(5), pp.405-407.
- Daley, D., 2014. The evolution of the hygiene hypothesis: the role of early-life exposures to viruses and microbes and their relationship to asthma and allergic diseases. Current opinion in allergy and clinical immunology, 14(5), pp.390-396.
- Das, R., Hampton, D.D. and Jirtle, R.L., 2009. Imprinting evolution and human health. Mammalian Genome, 20(9-10), pp.563-572.
- De Cock, K.M., Jaffe, H.W. and Curran, J.W., 2012. The evolving epidemiology of HIV/AIDS. Aids, 26(10), pp.1205-1213.
- de La Vega, M.A., Stein, D. and Kobinger, G.P., 2015. Ebolavirus evolution: past and present. PLoS pathogens, 11(11), p.e1005221.
- Dethlefsen, L., McFall-Ngai, M. and Relman, D.A., 2007. An ecological and evolutionary perspective on human–microbe mutualism and disease. Nature, 449(7164), p.811.
- Djian, P., 1998. Evolution of simple repeats in DNA and their relation to human disease. Cell, 94(2), pp.155-160.
- Domazet-Lošo, T. and Tautz, D., 2008. An ancient evolutionary origin of genes associated with human genetic diseases. Molecular biology and evolution, 25(12), pp.2699-2707.
- Dudek, T.E., No, D.C., Seung, E., Vrbanac, V.D., Fadda, L., Bhoumik, P., Boutwell, C.L., Power, K.A., Gladden, A.D., Battis, L. and Mellors, E.F., 2012. Rapid evolution of HIV-1 to functional CD8+ T cell responses in humanized BLT mice. Science translational medicine, 4(143), pp.143ra98-143ra98.
- Duggal, N.K. and Emerman, M., 2012. Evolutionary conflicts between viruses and restriction factors shape immunity. Nature reviews Immunology, 12(10), p.687.
- Durand-Gasselin, B., Leclercq, R., Girard-Pipau, F., Deharvengt, M.C., Rochant, H., Astier, A., Duval, J. and Cordonnier, C., 1995. Evolution of bacterial susceptibility to antibiotics during a six-year period in a haematology unit. Journal of Hospital Infection, 29(1), pp.19-33.
- Ewald, P.W., 1980. Evolutionary biology and the treatment of signs and symptoms of infectious disease. Journal of theoretical Biology, 86(1), pp.169-176.
- Farrell, M.J. and Davies, T.J., 2019. Disease mortality in domesticated animals is predicted by host evolutionary relationships. Proceedings of the National Academy of Sciences, 116(16), pp.7911-7915.
- Finch, C.E., 2010. Evolution of the human lifespan and diseases of aging: roles of infection, inflammation, and nutrition. Proceedings of the National Academy of Sciences, 107(suppl 1), pp.1718-1724.
- Gatherer, D., 2014. The 2014 Ebola virus disease outbreak in West Africa. Journal of general virology, 95(8), pp.1619-1624.
- Gilley, J. and Fried, M., 1999. Extensive gene order differences within regions of conserved synteny between the Fugu and human genomes: implications for chromosomal evolution and the cloning of disease genes. Human molecular genetics, 8(7), pp.1313-1320.
- Gire, S.K., Goba, A., Andersen, K.G., Sealfon, R.S., Park, D.J., Kanneh, L., Jalloh, S., Momoh, M., Fullah, M., Dudas, G. and Wohl, S., 2014. Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak. science, 345(6202), pp.1369-1372.
- Gluckman, P.D. and Hanson, M.A., 2004. Living with the past: evolution, development, and patterns of disease. Science, 305(5691), pp.1733-1736.
- Gluckman, P.D., Hanson, M.A. and Spencer, H.G., 2005. Predictive adaptive responses and human evolution. Trends in ecology & evolution, 20(10), pp.527-533.
- Gluckman, P.D., Low, F.M., Buklijas, T., Hanson, M.A. and Beedle, A.S., 2011. How evolutionary principles improve the understanding of human health and disease. Evolutionary Applications, 4(2), pp.249-263.
- Goward, C.R., Scawen, M.D., Murphy, J.P. and Atkinson, T., 1993. Molecular evolution of bacterial cell-surface proteins. Trends in biochemical sciences, 18(4), pp.136-140.
- Grenfell, B.T., Pybus, O.G., Gog, J.R., Wood, J.L., Daly, J.M., Mumford, J.A. and Holmes, E.C., 2004. Unifying the epidemiological and evolutionary dynamics of pathogens. science, 303(5656), pp.327-332.
- Groenink, M., Fouchier, R.A., Broersen, S., Baker, C.H., Koot, M., van't Wout, A.B., Huisman, H.G., Miedema, F., Tersmette, M. and Schuitemaker, H., 1993. Relation of phenotype evolution of HIV-1 to envelope V2 configuration. Science, 260(5113), pp.1513-1516.
- Hannenhalli, S. and Kaestner, K.H., 2009. The evolution of Fox genes and their role in development and disease. Nature Reviews Genetics, 10(4), p.233.
- Holmes, E.C. and Drummond, A.J., 2007. The evolutionary genetics of viral emergence. In Wildlife and emerging zoonotic diseases: The biology, circumstances and consequences of cross-species transmission (pp. 51-66). Springer, Berlin, Heidelberg.
- Holmes, E.C. and Rambaut, A., 2004. Viral evolution and the emergence of SARS coronavirus. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 359(1447), pp.1059-1065.
- Jackson, R.W., Johnson, L.J., Clarke, S.R. and Arnold, D.L., 2011. Bacterial pathogen evolution: breaking news. Trends in genetics, 27(1), pp.32-40.
- James, W.P.T., Johnson, R.J., Speakman, J.R., Wallace, D.C., Frühbeck, G., Iversen, P.O. and Stover, P.J., 2019. Nutrition and its role in human evolution. Journal of internal medicine, 285(5), pp.533-549.
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